Biodiversity and Plant Systematics Publications

ORCID

(google scholar U8I0AAAAJ)

Sanchez Vera V, Landberg K, Lopez-Obando M, Thelander M, Lagercrantz U, Munos R, Schmidt A, Grossniklaus U, Sundberg, E (2022). The Physcomitrium patens egg cell changes the epigenetic program and utilizes homologs of Arabidopsis male genes, including BONOBOs, for cell specification. New Phytol. 233(6), 2614-28.

Stein RE§, Nauerth BH§, Binmöller L, Zühl L, Loreth A, Reinert M, Ibberson D, Schmidt A.* (2021). RH17 acts in repression of reproductive fate and autonomous seed coat development in Arabidopsis. Development, 148 (19):dev.198739. § contributed equally *corresponding author.

Kiefer M§, Nauerth BH, Volkert C, Ibberson D, Loreth A, Schmidt A.§* (2020) Gene function rather than reproductive mode drives the evolution of RNA helicases in sexual and apomictic Boechera. Genome Biol Evol. 12(5):656-673. § contributed equally * corresponding author.

 Schmidt A.* (2020) Controlling apomixis: Shared features and distinct characteristics of gene regulation. Genes 11(3):329. * corresponding author

 Zühl L, Volkert C, Ibberson D, Schmidt A.* (2019) Differential activity of F-box genes and E3 ligases distinguishes sexual versus apomictic germline specification in Boechera. J. Exp. Bot. 70(20):5643-5657. doi: 10.1093/jxb/erz323. * corresponding author

  Preprint available on: bioRxiv. doi: https://doi.org/10.1101/403915.

Zhao X, Bramsiepe J, Van Durme M, Komaki S, Prusicki MA, Maruyama D, Forner J, Medzihradszky A, Wijnker E, Harashima H, Lu Y, Schmidt A, Guthörl D, Logroño RS, Guan Y, Pochon G, Grossniklaus U, Laux T, Higashiyama T, Lohmann JU, Nowack MK, Schnittger A. (2017) RETINOBLASTOMA RELATED1 mediates germline entry in Arabidopsis. Science 356, Issue 6336, eaaf6532. doi: 10.1126/science.aaf6532

Kotlinski M, Knizewski L, Muszewska A, Rutowicz K, Lirski M, Schmidt A, Baroux C, Ginalski K, Jerzmanowski A. (2017) Phylogeny-based systematization of Arabidopsis proteins with histone H1 globular domain. Plant Physiol. pp.00214.2017. doi:10.1104/pp.16.00214.

Florez-Rueda AM, Paris M, Schmidt A, Widmer A, Grossniklaus U, Städler T. (2016) Genomic imprinting in the endosperm is systematically perturbed in abortive hybrid tomato seeds. Mol Biol Evol. 33(11):2935-2946. doi:10.1093/molbev/msw175.

Florez-Rueda AM, Grossniklaus U, Schmidt A.* (2016) Laser-assisted microdissection as tool for transcriptional profiling of individual cell types. J Vis Exp. 10(111). doi: 10.3791/53916. *corresponding author

Schmid MW§*, Schmidt A§*, Grossniklaus U.* (2015) The female gametophyte: an emerging model for cell type-specific systems biology in plant development. Front Plant Sci. 6:907. doi:10.3389/fpls.2015.00907 § contributed equally * corresponding authors

Schmidt A*, Schmid MW, Grossniklaus U.* (2015) Plant germline formation: common concepts and developmental flexibility in sexual and asexual reproduction. Development 142(2):229-41. doi: 10.1242/dev.102103. * corresponding authors

Sailer C, Schmidt A, Grossniklaus U. (2015) Determination of the developmental origin of seeds containing endosperm using flow cytometric analyses. doi: 10.21769/BioProtoc.1484.

Schmidt A*, Schmid MW, Klostermeier UC, Qi W, Guthörl D, Sailer C, Waller M, Rosenstiel P, Grossniklaus U.* (2014) Apomictic and sexual germline development differ with respect to cell cycle, transcriptional, hormonal and epigenetic regulation. PLoS Genet. 10(7):e1004476. doi: 10.1371/journal.pgen.1004476. * corresponding authors

Schmidt A, Wöhrmann HJ, Raissig MT, Arand J, Gheyselinck J, Gagliardini V, Heichinger C, Walter J, Grossniklaus U. (2013) The Polycomb group protein MEDEA and the DNA methyltransferase MET1 interact to repress autonomous endosperm development in Arabidopsis. Plant J. 2013 73(5):776-87. doi: 10.1111/tpj.12070.

Schmidt A*, Schmid MW, Grossniklaus U. (2012) Analysis of plant germline development by high-throughput RNA profiling: technical advances and new insights. Plant J. 70(1):18-29. doi: 10.1111/j.1365-313X.2012.04897.x. * corresponding author

Wöhrmann HJ, Gagliardini V, Raissig MT, Wehrle W, Arand J, Schmidt A, Tierling S, Page DR, Schöb H, Walter J, Grossniklaus U.  (2012) Identification of a DNA methylation-independent imprinting control region at the Arabidopsis MEDEA locus. Genes Dev. 26(16):1837-50. doi: 10.1101/gad.195123.112

Schmid MW, Schmidt A, Klostermeier UC, Barann M, Rosenstiel P, Grossniklaus U. (2012) A powerful method for transcriptional profiling of specific cell types in eukaryotes: laser-assisted microdissection and RNA sequencing. PLoS One. 7(1):e29685. doi: 10.1371/journal.pone.0029685.

Schmidt A, Wuest SE, Vijverberg K, Baroux C, Kleen D, Grossniklaus U. (2011) Transcriptome analysis of the Arabidopsis megaspore mother cell uncovers the importance of RNA helicases for plant germline development. PLoS Biol. 9(9):e1001155. doi: 10.1371/journal.pbio.1001155.

Wuest SE, Vijverberg K, Schmidt A, Weiss M, Gheyselinck J, Lohr M, Wellmer F, Rahnenführer J, von Mering C, Grossniklaus U.  (2010) Arabidopsis female gametophyte gene expression map reveals similarities between plant and animal gametes. Curr Biol. 20(6):506-12. doi: 10.1016/j.cub.2010.01.051.

Schmidt A, Baumann N, Schwarzkopf A, Frommer WB, Desimone M. (2006) Comparative studies on Ureide Permeases in Arabidopsis thaliana and analysis of two alternative splice variants of AtUPS5. Planta 224(6):1329-40.

Deuschle K, Fehr M, Hilpert M, Lager I, Lalonde S, Looger LL, Okumoto S, Persson J, Schmidt A, Frommer WB. (2005) Genetically encoded sensors for metabolites. Cytometry A 64(1):3-9.

Schmidt A §, Su YH §, Kunze R, Warner S, Hewitt M, Slocum RD, Ludewig U, Frommer WB, Desimone M. (2004) UPS1 and UPS2 from Arabidopsis mediate high affinity transport of uracil and 5-fluorouracil. J Biol Chem. 279(43):44817-24. § contributed equally

Okumoto S, Deuschle K, Fehr M, Hilpert M, Lager I, Lalonde S, Looger LL, Person J, Schmidt A, Frommer WB. (2004) Genetically encoded sensors for metabolites. Soil Science and Plant Nutrition 50(7):947-953.

 

As Editor

Schmidt A (editor), vol 1669, Plant Germline Development. Methods in Molecular Biology (2017). Springer, Netherlands, 420 pages